Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926076.1_cds_XP_016474163.1_66217
CDS Infomation

[gene=LOC107795966] [db_xref=GeneID:107795966] [protein=U-box domain-containing protein 35-like] [protein_id=XP_016474163.1] [location=complement(join(99388..99579,99715..100464,100556..100984,101073..101174,101358..101683,102124..102314,103407..103528,103593..103714,104518..104725))] [gbkey=CDS]
Sequence

ATGGAAGAAAAAGGTGGAGTAGTAACTAAAGTGGAAGGCCTAAGTGCTTTGAATCCATTA
AACTCTTCCACAATTGCAGTAGCTATTAATGGTAAGAGAAAAAGCAAATATGTAGTGAGC
TGGGCATTGAACAAATTTGTTCCTGAAGGAAAGGTTTGCTTCAAGCTGTTACATGTCCGG
CCGTGCATAACTGGTGTGCCAACCCCAATGGGAAACTCTATACCTATTTCACAAGTGCGG
GATGATGTAGTGGCTGCTTTCCGAAAGGATGTCGAATGGCAAACAAGTGAAAAGCTGCAT
CCTTACAAGATGTTATGCACTAAACGAAAGGTCCTAGTAGAAGTTTTACAACTCGAATCA
GATGATATCGCGAAAGCAATAGCGGAGGAAGTCTCCAAGCTTAACATCACCAAGCTTGTC
ATAGGTGCTTCATCTCGTAGCATCTTTTCTAGGGGACAAAGCTTATCCTCAAGAATCTCA
GACAGTATTCCAAGCTTTTGTACAATCTATGCTGTTTCAAGAGGAAAGTTGTTATCTATA
CGTCCTTCTAATTCAGAGATAAATGCAAGCAGTTGGACTGAAGATAGTAACACAAACTTC
TCAATCAGCAGTTCAACAGGCCTTTCTTCCAGTTTACTAACAGAAAAGTCAGACCTGGAC
TCAAGTTCTTCGTACAGTCAATTCCGTTCTCCTTCACTGCCAATGCAAAGATTTCAAGCT
CTTTCAAATATTAATCAGAACTTTCCTAATAGAAGAGCAATCTCAAATGAAACCGTTCAC
CATAAGAACTATTCTCTTGATTTTGGAGACAGCGAGGACGATGTCAGTTATTGTCCCCAG
AGATCATTTCTTAGTGAAAGGAATAACCTTACTTCTAGTTTTAGGAGCTTAGTAACAGAG
TTTTATTCAACGGCAGATGATCAAGCTTCCACCTCAGGGGCTCCAACAGATTTATCATTG
AGAAATGAGGCGGATATCAATTTTGAGCTAGAGAAGCTAAGAACTGAACTAAGACATACT
CAAGGAATGTATGCAGTTGCACAAACTGAAGTGCTTGATGCTTCTAGGAAGATGAATGAG
CTTCAAAACCGCCGGTTGGAGGAAGAAATTAAACTCCGGGAAATTAGTTTAAAGGAGGAA
GAAGCAAAAGATTTGGTACGAAAAGAGAATGAGGAGTACGAAGCTGCAAAAAGAGAAGCT
GATTATGTGAAGGACTGTGCTGAAAGAGAGGCTGCACAAAGAAAAGAAGCAGAACTATTA
GCCTTACGTGAGGCAAAAGAAAAAGACAAGCTTGAAAATGCCTTGACAGATCAGGCACAT
CAGTACCAGGAATTTACTTGGGAAGAAATCGTATCTTCCACCTCTTCATTTGCTGAAAAT
CTTAAAATTGGTATGGGCGGATATGGAACCGTTTATAAGTGCAGCTTGCGTCATACTACA
GTCGCCGTCAAAGTTCTTCACTCCAAGGGATCTGACCTGACGAAGCAGTTTCAGCAAGAG
CTGAAAATATTGAGCAAAATTCGTCATCAACACTTGTTAATCCTTCTTGGCGTGTGCCCT
GATCGTGGTTGCTTAGTGTATGAGTTCATGGAAAATGGTAGCTTAGAGGAGAGGCTGTTC
AGGAAACATGATACACCTCCAATTCCATGGTTTGATAGATATCGAATTGCATGGGAAGTG
GCCTCTGCGCTCGCCTTTCTTCACAACTCCAAGCCAGATCCAATTATTCATCGTGATCTA
AAGCCAGCTAACATATTGCTTGATCGTAATTTTGTTAGTAAAATTGGCGATGTTGGCCTG
TCAACCATGATAAATTCAGAAGCTGCATTATCCACCATTTACAGAGATACAGGTCCTGTG
GGAACACTTTGCTACATCGACCCTGAGTACCAAAGGACCGGAATGATCTCTCCAAAATCT
GACGTTTATGCATTTGGGATGGTTCTCTTGCAGTTGTTAACAGCAAAAGCAGCAATGGGA
CTTCCCCACATTGTTGAAACAGCAATCGATAAGGATAGTCTAACTAAGGTACTAGATTCA
AAGGCTGGTGAATGGCCATTAGAAGAGACAAAGAAACTAGCAGCGCTAGCACTTAAATGC
ACAGAGATCTCTCGAAGAGACAGGCCCGATTTGAAAGACGAAATTCTCCCTGCGTTGAAG
AGATTGAAAGTGGTTGCTGATAAGGCTCGAGATTCTGCCTCCACTACCCGGCCTCCTCCC
CCTACCTACTACTTGTGCCCTTTACTCAAGGATGTAATGGAGGAACCTTGTGTGGCAGCT
GATGGGTATACTTATGACAGGAAGGCGATAGAAACATGGCTAAAGGAGAACGATATATCA
CCTATGACAAACCTACCGTTACCTCATAAGAACCTTCTACCAAATTATGCACTGCTTTCT
GCAATTCTGGACTGGAAATCAAGAAAGGATGGAAATATTTAG

Peptide Sequence

PEP ID

XP_016474163.1
PEP Infomation

PREDICTED: U-box domain-containing protein 35-like [Nicotiana tabacum]
Sequence

MEEKGGVVTKVEGLSALNPLNSSTIAVAINGKRKSKYVVSWALNKFVPEGKVCFKLLHVR
PCITGVPTPMGNSIPISQVRDDVVAAFRKDVEWQTSEKLHPYKMLCTKRKVLVEVLQLES
DDIAKAIAEEVSKLNITKLVIGASSRSIFSRGQSLSSRISDSIPSFCTIYAVSRGKLLSI
RPSNSEINASSWTEDSNTNFSISSSTGLSSSLLTEKSDLDSSSSYSQFRSPSLPMQRFQA
LSNINQNFPNRRAISNETVHHKNYSLDFGDSEDDVSYCPQRSFLSERNNLTSSFRSLVTE
FYSTADDQASTSGAPTDLSLRNEADINFELEKLRTELRHTQGMYAVAQTEVLDASRKMNE
LQNRRLEEEIKLREISLKEEEAKDLVRKENEEYEAAKREADYVKDCAEREAAQRKEAELL
ALREAKEKDKLENALTDQAHQYQEFTWEEIVSSTSSFAENLKIGMGGYGTVYKCSLRHTT
VAVKVLHSKGSDLTKQFQQELKILSKIRHQHLLILLGVCPDRGCLVYEFMENGSLEERLF
RKHDTPPIPWFDRYRIAWEVASALAFLHNSKPDPIIHRDLKPANILLDRNFVSKIGDVGL
STMINSEAALSTIYRDTGPVGTLCYIDPEYQRTGMISPKSDVYAFGMVLLQLLTAKAAMG
LPHIVETAIDKDSLTKVLDSKAGEWPLEETKKLAALALKCTEISRRDRPDLKDEILPALK
RLKVVADKARDSASTTRPPPPTYYLCPLLKDVMEEPCVAADGYTYDRKAIETWLKENDIS
PMTNLPLPHKNLLPNYALLSAILDWKSRKDGNI

Transcript Sequence

Gene sequence data has not been registered.